To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MSGFplus")

In most cases, you don't need to download the package archive at all.

MSGFplus

This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see MSGFplus.

An interface between R and MS-GF+

Bioconductor version: 3.3

This package contains function to perform peptide identification using MS-GF+

Author: Thomas Lin Pedersen

Maintainer: Thomas Lin Pedersen <thomasp85 at gmail.com>

Citation (from within R, enter citation("MSGFplus")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MSGFplus")

biocViews	MassSpectrometry, Proteomics, Software
Version	1.6.2
In Bioconductor since	BioC 3.0 (R-3.1) (2 years)
License	GPL (>= 2)
Depends	methods
Imports	mzID
LinkingTo
Suggests	gWidgets, knitr, testthat
SystemRequirements	Java (>= 1.7)
Enhances
URL
Depends On Me
Imports Me	MSGFgui
Suggests Me	RforProteomics
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	MSGFplus_1.6.2.tar.gz
Windows Binary	MSGFplus_1.6.2.zip
Mac OS X 10.9 (Mavericks)	MSGFplus_1.6.2.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/MSGFplus/tree/release-3.3
Package Short Url	http://bioconductor.org/packages/MSGFplus/
Package Downloads Report	Download Stats

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