UCSCRepeatMasker

This is the released version of UCSCRepeatMasker; for the devel version, see UCSCRepeatMasker.

UCSC RepeatMasker AnnotationHub resource metadata

Bioconductor version: Release (3.21)

Store UCSC RepeatMasker AnnotationHub resource metadata. Provide provenance and citation information for UCSC RepeatMasker AnnotationHub resources. Illustrate in a vignette how to access those resources.

Author: Robert Castelo [aut, cre], Beatriz Calvo [ctb]

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("UCSCRepeatMasker")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("UCSCRepeatMasker")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("UCSCRepeatMasker")

UCSC RepeatMasker AnnotationHub Resource Metadata	HTML	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	AnnotationData, AnnotationHub
Version	3.15.2
License	Artistic-2.0
Depends	AnnotationHub, GenomeInfoDb
Imports	XML, RCurl
System Requirements
URL

Suggests	knitr, rmarkdown, BiocStyle
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	UCSCRepeatMasker_3.15.2.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url	https://bioconductor.org/packages/UCSCRepeatMasker/
Package Downloads Report	Download Stats