iSEEindex
This package is for version 3.20 of Bioconductor; for the stable, up-to-date release version, see iSEEindex.
iSEE extension for a landing page to a custom collection of data sets
Bioconductor version: 3.20
This package provides an interface to any collection of data sets within a single iSEE web-application. The main functionality of this package is to define a custom landing page allowing app maintainers to list a custom collection of data sets that users can selected from and directly load objects into an iSEE web-application.
Author: Kevin Rue-Albrecht [aut, cre]
, Thomas Sandmann [ctb]
, Federico Marini [aut]
, Denali Therapeutics [fnd]
Maintainer: Kevin Rue-Albrecht <kevinrue67 at gmail.com>
citation("iSEEindex")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("iSEEindex")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("iSEEindex")| Adding custom header and footer to the landing page | HTML | R Script |
| Implementing custom iSEEindex resources | HTML | R Script |
| Introduction to iSEEindex | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Infrastructure, Software |
| Version | 1.4.0 |
| In Bioconductor since | BioC 3.18 (R-4.3) (1.5 years) |
| License | Artistic-2.0 |
| Depends | SummarizedExperiment, SingleCellExperiment |
| Imports | BiocFileCache, DT, iSEE, methods, paws.storage, rintrojs, shiny, shinydashboard, shinyjs, stringr, urltools, utils |
| System Requirements | |
| URL | https://github.com/iSEE/iSEEindex |
| Bug Reports | https://support.bioconductor.org/t/iSEEindex |
See More
| Suggests | BiocStyle, covr, knitr, RefManageR, rmarkdown, markdown, scRNAseq, sessioninfo, testthat (>= 3.0.0), yaml |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | iSEEindex_1.4.0.tar.gz |
| Windows Binary (x86_64) | iSEEindex_1.4.0.zip |
| macOS Binary (x86_64) | iSEEindex_1.4.0.tgz |
| macOS Binary (arm64) | iSEEindex_1.4.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/iSEEindex |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/iSEEindex |
| Bioc Package Browser | https://code.bioconductor.org/browse/iSEEindex/ |
| Package Short Url | https://bioconductor.org/packages/iSEEindex/ |
| Package Downloads Report | Download Stats |