ObMiTi

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see ObMiTi.

Ob/ob Mice Data on Normal and High Fat Diet

Bioconductor version: 3.14

The package provide RNA-seq count for 2 strains of mus musclus; Wild type and Ob/Ob. Each strain was divided into two groups, and each group received either chow diet or high fat diet. RNA expression was measured after 20 weeks in 7 tissues.

Author: Omar Elashkar [aut, cre] , Mahmoud Ahmed [aut]

Maintainer: Omar Elashkar <omar.i.elashkar at gmail.com>

Citation (from within R, enter citation("ObMiTi")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ObMiTi")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ObMiTi")

Using ObMiTi	HTML	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData, ExperimentHub, GEO, RNASeqData
Version	1.2.0
License	GPL-3
Depends	R (>= 4.1), SummarizedExperiment, ExperimentHub
Imports
System Requirements
URL	https://github.com/OmarElAshkar/ObMiTi
Bug Reports	https://github.com/OmarElAshkar/ObMiTi/issues

Suggests	knitr, rmarkdown, BiocManager, GenomicFeatures, S4Vectors, devtools, testthat
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ObMiTi_1.2.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/ObMiTi
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ObMiTi
Package Short Url	https://bioconductor.org/packages/ObMiTi/
Package Downloads Report	Download Stats