simulatorZ
This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.13 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see simulatorZ.
Simulator for Collections of Independent Genomic Data Sets
Bioconductor version: 3.13
simulatorZ is a package intended primarily to simulate collections of independent genomic data sets, as well as performing training and validation with predicting algorithms. It supports ExpressionSet and RangedSummarizedExperiment objects.
Author: Yuqing Zhang, Christoph Bernau, Levi Waldron
Maintainer: Yuqing Zhang <zhangyuqing.pkusms at gmail.com>
citation("simulatorZ")):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("simulatorZ")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | Software, Survival |
| Version | 1.26.0 |
| In Bioconductor since | BioC 3.0 (R-3.1) (9.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 3.5), Biobase, SummarizedExperiment, survival, CoxBoost, BiocGenerics |
| Imports | graphics, stats, gbm, Hmisc, GenomicRanges, methods |
| System Requirements | |
| URL | https://github.com/zhangyuqing/simulatorZ |
| Bug Reports | https://github.com/zhangyuqing/simulatorZ |
See More
| Suggests | RUnit, BiocStyle, curatedOvarianData, parathyroidSE |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary | |
| macOS 10.13 (High Sierra) | |
| Source Repository | git clone https://git.bioconductor.org/packages/simulatorZ |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/simulatorZ |
| Package Short Url | https://bioconductor.org/packages/simulatorZ/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.13 | Source Archive |