To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("PREDA")
In most cases, you don't need to download the package archive at all.
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This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see PREDA.
Bioconductor version: 3.1
Package for the position related analysis of quantitative functional genomics data.
Author: Francesco Ferrari <francesco.ferrari at unimore.it>
Maintainer: Francesco Ferrari <francesco.ferrari at unimore.it>
Citation (from within R,
enter citation("PREDA")):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("PREDA")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("PREDA")
| R Script | PREDA S4-classes | |
| R Script | PREDA tutorial | |
| Reference Manual |
| biocViews | CopyNumberVariation, GeneExpression, Genetics, Software |
| Version | 1.14.0 |
| In Bioconductor since | BioC 2.9 (R-2.14) (4.5 years) |
| License | GPL-2 |
| Depends | R (>= 2.9.0), Biobase, lokern (>= 1.0.9), multtest, stats, methods, annotate |
| Imports | |
| LinkingTo | |
| Suggests | quantsmooth, qvalue, samr, limma, caTools, affy, PREDAsampledata |
| SystemRequirements | |
| Enhances | Rmpi, rsprng |
| URL | |
| Depends On Me | PREDAsampledata |
| Imports Me | |
| Suggests Me | |
| Build Report |
Follow Installation instructions to use this package in your R session.
| Package Source | PREDA_1.14.0.tar.gz |
| Windows Binary | PREDA_1.14.0.zip |
| Mac OS X 10.6 (Snow Leopard) | PREDA_1.14.0.tgz |
| Mac OS X 10.9 (Mavericks) | PREDA_1.14.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/PREDA/tree/release-3.1 |
| Package Short Url | http://bioconductor.org/packages/PREDA/ |
| Package Downloads Report | Download Stats |
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