To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CMA")
In most cases, you don't need to download the package archive at all.
CMA
|
This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see CMA.
Synthesis of microarray-based classification
Bioconductor version: 3.1
This package provides a comprehensive collection of various microarray-based classification algorithms both from Machine Learning and Statistics. Variable Selection, Hyperparameter tuning, Evaluation and Comparison can be performed combined or stepwise in a user-friendly environment.
Author: Martin Slawski <ms at cs.uni-sb.de>, Anne-Laure Boulesteix <boulesteix at ibe.med.uni-muenchen.de>, Christoph Bernau <bernau at ibe.med.uni-muenchen.de>.
Maintainer: Christoph Bernau <bernau at ibe.med.uni-muenchen.de>
Citation (from within R,
enter citation("CMA")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CMA")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CMA")
| R Script | CMA_vignette.pdf | |
| Reference Manual |
Details
| biocViews | Classification, DecisionTree, Software |
| Version | 1.26.0 |
| In Bioconductor since | BioC 2.3 (R-2.8) (7.5 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.10), methods, stats, Biobase |
| Imports | |
| LinkingTo | |
| Suggests | MASS, class, nnet, glmnet, e1071, randomForest, plsgenomics, gbm, mgcv, corpcor, limma, st, mvtnorm |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | CMA_1.26.0.tar.gz |
| Windows Binary | CMA_1.26.0.zip |
| Mac OS X 10.6 (Snow Leopard) | CMA_1.26.0.tgz |
| Mac OS X 10.9 (Mavericks) | CMA_1.26.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/CMA/tree/release-3.1 |
| Package Short Url | http://bioconductor.org/packages/CMA/ |
| Package Downloads Report | Download Stats |
Documentation »
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