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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("codelink")
In most cases, you don't need to download the package archive at all.
codelink
|
This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see codelink.
Manipulation of Codelink Bioarrays data.
Bioconductor version: 2.8
This packages allow reading into R of Codelink bioarray data exported as text from the Codelink software. Also includes some functions to ease the manipulation and pre-processing of data, such in background correction and normalization.
Author: Diego Diez <diez at kuicr.kyoto-u.ac.jp>
Maintainer: Diego Diez <diez at kuicr.kyoto-u.ac.jp>
Citation (from within R,
enter citation("codelink")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("codelink")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("codelink")
| codelink.pdf | ||
| CodelinkSet.pdf | ||
| Reference Manual |
Details
| biocViews | DataImport, Microarray, OneChannel, Preprocessing, Software |
| Version | 1.20.0 |
| In Bioconductor since | BioC 1.8 (R-2.3) (10 years) |
| License | GPL-2 |
| Depends | methods, Biobase(>= 2.5.5), limma |
| Imports | annotate |
| LinkingTo | |
| Suggests | genefilter |
| SystemRequirements | |
| Enhances | multicore |
| URL | http://www.kuicr.kyoto-u.ac.jp/~diez |
| Depends On Me | |
| Imports Me | |
| Suggests Me | AgiMicroRna, MAQCsubset |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | codelink_1.20.0.tar.gz |
| Windows Binary | codelink_1.20.0.zip |
| Mac OS X 10.6 (Snow Leopard) | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/codelink/tree/release-2.8 |
| Package Short Url | http://bioconductor.org/packages/codelink/ |
| Package Downloads Report | Download Stats |
Documentation »
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