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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("cellHTS2")
In most cases, you don't need to download the package archive at all.
cellHTS2
|
This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see cellHTS2.
Analysis of cell-based screens - revised version of cellHTS
Bioconductor version: 2.8
Analysis of cell-based RNA interference screens. See ?cellHTS2 for a brief introduction.
Author: Ligia Bras, Wolfgang Huber <whuber at embl.de>, Michael Boutros <m.boutros at dkfz.de>, Gregoire Pau <gpau at embl.de>, Florian Hahne <florian.hahne at novartis.com>
Maintainer: Florian Hahne <florian.hahne at novartis.com>
Citation (from within R,
enter citation("cellHTS2")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("cellHTS2")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("cellHTS2")
| cellhts2.pdf | ||
| cellhts2Complete.pdf | ||
| twoChannels.pdf | ||
| twoWay.pdf | ||
| Reference Manual |
Details
| biocViews | CellBasedAssays, Preprocessing, Software, Visualization |
| Version | 2.16.0 |
| In Bioconductor since | BioC 2.1 (R-2.6) (8.5 years) |
| License | Artistic-2.0 |
| Depends | RColorBrewer, Biobase, methods, genefilter, splots, vsn, hwriter, locfit, grid |
| Imports | prada, GSEABase, Category |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | http://www.dkfz.de/signaling http://www.ebi.ac.uk/huber |
| Depends On Me | coRNAi, HTSanalyzeR, imageHTS |
| Imports Me | HTSanalyzeR, RNAinteract |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | cellHTS2_2.16.0.tar.gz |
| Windows Binary | cellHTS2_2.16.0.zip |
| Mac OS X 10.6 (Snow Leopard) | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/cellHTS2/tree/release-2.8 |
| Package Short Url | http://bioconductor.org/packages/cellHTS2/ |
| Package Downloads Report | Download Stats |
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