To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RTCA")
In most cases, you don't need to download the package archive at all.
RTCA
|
This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see RTCA.
Open-source toolkit to analyse data from xCELLigence System (RTCA) by Roche
Bioconductor version: 2.8
Import, analyze and visualize data harvested from Roche(R) Xcelligence RTCA systems. The package imports the rich information in real-time cell electrical impedance data into computational and statistical environment R/Bioconductor. As an alternative to commercial software provided by Roche, the RTCA package provides more transformation (normalization) strategies and various visualization tools.
Author: Jitao David Zhang, with input from Ulrich Tschulena, Özgür Sahin and Stefan Wiemann
Maintainer: Jitao David Zhang <j.zhang at dkfz.de>
Citation (from within R,
enter citation("RTCA")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RTCA")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RTCA")
| aboutRTCA.pdf | ||
| RTCAtransformation.pdf | ||
| Reference Manual |
Details
| biocViews | CellBasedAssays, Infrastructure, Software, TimeCourse, Visualization |
| Version | 1.4.0 |
| In Bioconductor since | BioC 2.5 (R-2.10) (6.5 years) |
| License | LGPL-3 |
| Depends | methods, stats, graphics, Biobase, RColorBrewer, gtools |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | http://code.google.com/p/xcelligence/ http://www.xcelligence.roche.com/ http://www.nextbiomotif.com/Home/scientific-programming |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | RTCA_1.4.0.tar.gz |
| Windows Binary | RTCA_1.4.0.zip |
| Mac OS X 10.6 (Snow Leopard) | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/RTCA/tree/release-2.8 |
| Package Short Url | http://bioconductor.org/packages/RTCA/ |
| Package Downloads Report | Download Stats |
Documentation »
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