Bioconductor version: 2.6
Methods for the nalysis of data from clinical proteomic profiling studies. The focus is on the studies of human subjects, which are often observational case-control by design and have technical replicates. A method for sample size determination for planning these studies is proposed. It incorporates routines for adjusting for the expected heterogeneities and imbalances in the data and the within-sample replicate correlations.
Author: Stephen Nyangoma
Maintainer: Stephen Nyangoma <s.o.nyangoma at bham.ac.uk>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("clippda")
To cite this package in a publication, start R and enter:
citation("clippda")
| R Script | Sample Size Calculation | |
| Reference Manual |
| biocViews | Proteomics, OneChannel, DataPreprocessing, Bioinformatics, DifferentialExpression, MultipleComparisons, SampleSize |
| Depends | R (>= 2.10.0), limma, statmod, scatterplot3d, graphics, grDevices, stats, utils, Biobase, tools, methods |
| Imports | |
| Suggests | |
| System Requirements | |
| License | GPL (>=2) |
| URL | http://www.cancerstudies.bham.ac.uk/crctu/CLIPPDA.shtml |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.2.0 |
| Since | Bioconductor 2.5 (R-2.10) |
| Package Source | clippda_1.2.0.tar.gz |
| Windows Binary | clippda_1.2.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | clippda_1.2.0.tgz |
| Package Downloads Report | Download Stats |
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