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ppiStats
Protein-Protein Interaction Statistical Package
Bioconductor version: 2.5
Tools for the analysis of protein interaction data.
Author: T. Chiang and D. Scholtens with contributions from W. Huber and L. Wang
Maintainer: Tony Chiang <tchiang at fhcrc.org>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("ppiStats")
To cite this package in a publication, start R and enter:
citation("ppiStats")
Documentation
| R Script | ppiStats | |
| Reference Manual |
Details
| biocViews | Proteomics, GraphsAndNetworks |
| Depends | ScISI(>= 1.13.2), lattice, ppiData(>= 0.1.6) |
| Imports | Biobase, Category, graph, graphics, grDevices, lattice, methods, RColorBrewer, stats |
| Suggests | yeastExpData, xtable |
| System Requirements | |
| License | Artistic-2.0 |
| URL | |
| Depends On Me | PCpheno |
| Imports Me | |
| Suggests Me | BiocCaseStudies, ppiData, RpsiXML |
| Version | 1.12.0 |
| Since | Bioconductor 1.9 (R-2.4) |
Package Downloads
| Package Source | ppiStats_1.12.0.tar.gz |
| Windows Binary | ppiStats_1.12.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | ppiStats_1.12.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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