Bioconductor version: 2.5
This package was developed to simplify the use of Bioconductor tools for beginners having limited or no experience in writing R code. This library provides a graphical interface allowing QC, filtering, statistical validation, and alternative splicing analysis.
Author: Raffale A Calogero, Bioinformatics and Genomics Unit, Dept. of Clinical and Biological Sciences Torino (Italy)
Maintainer: Raffaele A Calogero <raffaele.calogero at unito.it>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("oneChannelGUI")
To cite this package in a publication, start R and enter:
citation("oneChannelGUI")
| fignew42.pdf | ||
| R Script | oneChannelGUI Installation | |
| R Script | oneChannelGUI Overview | |
| R Script | oneChannelGUI Stand Alone Functions | |
| R Script | oneChannelGUI What is New | |
| Reference Manual |
| biocViews | Microarray, OneChannel, DataImport, QualityControl, Preprocessing, Statistics, DifferentialExpression, MultipleComparisons |
| Depends | Biobase, affylmGUI, tkWidgets, GOstats, AnnotationDbi, preprocessCore |
| Imports | |
| Suggests | annotate, genefilter, maSigPro, pamr, pdmclass, Rgraphviz, affy, annaffy, affyPLM, multtest, ssize, sizepower, siggenes, RankProd, org.Hs.eg.db, org.Mm.eg.db, org.Rn.eg.db, metaArray, MergeMaid, biomaRt, GenomeGraphs, AffyCompatible, Biostrings, IRanges, rtracklayer, hugene10sttranscriptcluster.db, mogene10sttranscriptcluster.db, ragene10sttranscriptcluster.db |
| System Requirements | |
| License | The Artistic License, Version 2.0 |
| URL | http://www.bioinformatica.unito.it/oneChannelGUI/ |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.12.5 |
| Since | Bioconductor 2.0 (R-2.5) |
| Package Source | oneChannelGUI_1.12.5.tar.gz |
| Windows Binary | oneChannelGUI_1.12.5.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | oneChannelGUI_1.12.5.tgz |
| Package Downloads Report | Download Stats |
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