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affycomp
Graphics Toolbox for Assessment of Affymetrix Expression Measures
Bioconductor version: 2.5
The package contains functions that can be used to compare expression measures for Affymetrix Oligonucleotide Arrays.
Author: Rafael A. Irizarry <rafa at jhu.edu> and Zhijin Wu <zwu at jhsph.edu> with contributions from Simon Cawley <simon_cawley at affymetrix.com>,
Maintainer: Rafael A. Irizarry <rafa at jhu.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("affycomp")
To cite this package in a publication, start R and enter:
citation("affycomp")
Documentation
| R Script | affycomp primer | |
| Reference Manual |
Details
| biocViews | OneChannel, Microarray, Preprocessing |
| Depends | R (>= 2.9.0), methods, Biobase(>= 2.3.3) |
| Imports | |
| Suggests | splines |
| System Requirements | |
| License | GPL (>= 2) |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.22.1 |
| Since | Bioconductor 1.6 (R-2.1) or earlier |
Package Downloads
| Package Source | affycomp_1.22.1.tar.gz |
| Windows Binary | affycomp_1.22.1.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | affycomp_1.22.1.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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