To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("geneplotter")
In most cases, you don't need to download the package archive at all.
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This package is for version 2.12 of Bioconductor; for the stable, up-to-date release version, see geneplotter.
Bioconductor version: 2.12
Some basic functions for plotting genetic data
Author: R. Gentleman, Biocore
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R,
enter citation("geneplotter")):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("geneplotter")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("geneplotter")
| R Script | How to assemble a chromLocation object | |
| R Script | Visualization of Microarray Data | |
| Reference Manual | ||
| Text | README | |
| Text | NEWS |
| biocViews | Software, Visualization |
| Version | 1.38.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 11 years) |
| License | Artistic-2.0 |
| Depends | R (>= 2.10), Biobase(>= 2.5.5), annotate, lattice |
| Imports | annotate, AnnotationDbi, Biobase(>= 2.5.5), graphics, grDevices, grid, methods, RColorBrewer, stats, utils |
| LinkingTo | |
| Suggests | Biobase(>= 2.5.5), Rgraphviz, annotate, fibroEset, hgu95av2.db, hu6800.db, hgu133a.db |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | HD2013SGI, HMMcopy |
| Imports Me | biocGraph, DESeq, flowQ, IsoGeneGUI, MethylSeekR, RNAinteract, RNAither |
| Suggests Me | AgiMicroRna, BiocCaseStudies, biocGraph, Category, GOstats, maDB |
| Build Report |
Follow Installation instructions to use this package in your R session.
| Package Source | geneplotter_1.38.0.tar.gz |
| Windows Binary | geneplotter_1.38.0.zip |
| Mac OS X 10.6 (Snow Leopard) | geneplotter_1.38.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/geneplotter/tree/release-2.12 |
| Package Short Url | http://bioconductor.org/packages/geneplotter/ |
| Package Downloads Report | Download Stats |
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