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Recent Commits

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Last 10 commit to Bioconductor devel:

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Newest Packages

Software Packages

GOaGO	Gene Ontology enrichment analysis of gene pairs
ClonalSim	Simulation of Tumor Clonal Evolution with Realistic Sequencing Noise
queeems	Quantify the Extent of Evolutionary Evidence in Molecular Sequences
metabom8	A High-Performance R Package for Metabolomics Modeling and Analysis
ImageArray	A framework for on-disk and in-memory image arrays
BatChef	Single-cell RNA-seq batch effects correction methods interface
lncRna	A Comprehensive Workflow for Long Non-coding RNA Identification and Functional Analysis
wavFeatExt	Wavelet-based Feature Extraction for Copy-number Alteration Data
atacInferCnv	Call CNV from single cell ATAC-seq data based on InferCNV adaptation
immLynx	Linking Advanced TCR Python Pipelines and Hugging Face Models in R

Experiment Data Packages

HumanRetinaLRSData	Long-read RNA-seq gene count data from human retinal organoids
DMRsegaldata	Example DNAm Data for DMRsegal
curatedCRCData	Colorectal Cancer Gene Expression Analysis
EMTscoreData	Single-cell RNA-seq datasets of EMT responses from Cook et al. (2020)
MutSeqRData	Experimental Data for MutSeqR Examples
dominatRData	Datasets for R Package dominatR
DoReMiTra	Orchestrating Blood Radiation Transcriptomic Data
nmrdata	Example 1d NMR Data for Metabolic Profiling
ChIPDBData	ChIP-seq Target Databases for TFEA.ChIP
iModMixData	Data for iModMix Package

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Single Package Builder

All Current Submissions

Recent Submissions

cellchatr: Fast CellChat Database Querying Backed by Rust

EnsDb.Osativa.IRGSP.62

polyICSFlow

SimiCviz

bHIVE

MetaPathNet

sbivar

LIPIDIFy: Comprehensive Lipidomics Data Analysis and Visualization Framework

TiDEomics

grayleafspotr

Spectra backend to support import of data from MassIVE

Package Submission: AlphaGenomeR

myorgdbb

CycleMix

GSEAlens

pgen2gds

Fancy

friends.test

Fishash

karioCaS

Recent Builds

ProteinBatcher	2026-05-04T17:38:16
scFastDE	2026-05-04T17:32:42
growkar	2026-05-04T17:28:05
scBatchQC	2026-05-04T17:21:51
scBatchQC	2026-05-04T17:21:51
barmixR	2026-05-04T17:17:36
mesa	2026-05-04T17:16:00
AnnotatedBCGEData	2026-05-04T17:05:11
monarchr	2026-05-04T17:04:52
TSENAT	2026-05-04T17:04:40
OmniAgeR	2026-05-04T17:04:25
scBatchQC	2026-05-04T13:29:13
BamScale	2026-05-04T05:31:36
immGLIPH	2026-05-03T11:12:39
cellNexus	2026-04-29T03:34:16
BenchHub	2026-04-29T03:21:00
TraianProt	2026-04-27T09:15:51
TraianProt	2026-04-27T08:11:50
phylobar	2026-04-25T16:12:15
phylobar	2026-04-25T15:44:42

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Mirror Status

Last updated 2026-05-03T23:03:51-04:00. (Will be updated every 24 hours).

To use a Bioconductor mirror use the R function `chooseBioCmirror()`

URL	Mirror	Release	Devel
https://bioconductor.org/	yes	yes	yes
https://bioconductor.posit.co/	yes	yes	yes
https://bioconductor.statistik.tu-dortmund.de/	yes	yes	yes
https://ftp.gwdg.de/pub/misc/bioconductor/	yes	yes	yes
https://bioconductor.riken.jp/	yes	yes	no
https://free.nchc.org.tw/bioconductor/	yes	no	no
https://mirrors.tuna.tsinghua.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.nju.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.ustc.edu.cn/bioc/	yes	yes	yes
https://mirrors.westlake.edu.cn/bioconductor	yes	no	no
https://mirrors.zju.edu.cn/bioconductor	yes	yes	yes
https://bioconductor.uib.no/	yes	no	no
https://bioconductor.unipi.it	yes	no	no
https://cran.asia	yes	yes	yes
https://mirror.aarnet.edu.au/pub/bioconductor	yes	no	no
https://mirrors.dotsrc.org/bioconductor/	yes	yes	yes
https://mirror.accum.se/mirror/bioconductor.org/	yes	yes	yes

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