############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data cadd.v1.6.hg19 ### ############################################################################## ############################################################################## * checking for file ‘cadd.v1.6.hg19/DESCRIPTION’ ... OK * preparing ‘cadd.v1.6.hg19’: * checking DESCRIPTION meta-information ... OK * installing the package (it is needed to build vignettes) * creating vignettes ... ERROR --- re-building ‘cadd.v1.6.hg19.Rmd’ using rmarkdown Quitting from cadd.v1.6.hg19.Rmd:71-75 [retrieve3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! 24 resources failed to download --- Backtrace: ▆ 1. └─GenomicScores::getGScores("cadd.v1.6.hg19") 2. ├─AnnotationHub::cache(ah[ahids]) 3. └─AnnotationHub::cache(ah[ahids]) 4. └─AnnotationHub (local) .local(x, ...) 5. ├─methods::callNextMethod(...) 6. │ └─base::eval(call, callEnv) 7. │ └─base::eval(call, callEnv) 8. └─AnnotationHub (local) .nextMethod(...) 9. └─AnnotationHub (local) .local(x, ...) 10. └─AnnotationHub:::.cache_internal(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'cadd.v1.6.hg19.Rmd' failed with diagnostics: 24 resources failed to download --- failed re-building ‘cadd.v1.6.hg19.Rmd’ SUMMARY: processing the following file failed: ‘cadd.v1.6.hg19.Rmd’ Error: Vignette re-building failed. Execution halted