maanova

This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see maanova.

Tools for analyzing Micro Array experiments


Bioconductor version: 3.9

Analysis of N-dye Micro Array experiment using mixed model effect. Containing analysis of variance, permutation and bootstrap, cluster and consensus tree.

Author: Hao Wu, modified by Hyuna Yang and Keith Sheppard with ideas from Gary Churchill, Katie Kerr and Xiangqin Cui.

Maintainer: Keith Sheppard <keith.sheppard at jax.org>

Citation (from within R, enter citation("maanova")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("maanova")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("maanova")
R/maanova HowTo PDF
Reference Manual PDF

Details

biocViews Clustering, DifferentialExpression, Microarray, Software
Version 1.54.0
In Bioconductor since BioC 1.7 (R-2.2) (18.5 years)
License GPL (>= 2)
Depends R (>= 2.10)
Imports Biobase, graphics, grDevices, methods, stats, utils
System Requirements
URL http://research.jax.org/faculty/churchill
See More
Suggests qvalue, snow
Linking To
Enhances Rmpi
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package maanova_1.54.0.tar.gz
Windows Binary maanova_1.54.0.zip
Mac OS X 10.11 (El Capitan) maanova_1.54.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/maanova
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/maanova
Bioc Package Browser https://code.bioconductor.org/browse/maanova/
Package Short Url https://bioconductor.org/packages/maanova/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.9 Source Archive