gaia

This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see gaia.

GAIA: An R package for genomic analysis of significant chromosomal aberrations.


Bioconductor version: 3.9

This package allows to assess the statistical significance of chromosomal aberrations.

Author: Sandro Morganella et al.

Maintainer: S. Morganella <sandro at ebi.ac.uk>

Citation (from within R, enter citation("gaia")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("gaia")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("gaia")
gaia PDF R Script
Reference Manual PDF

Details

biocViews CopyNumberVariation, Software, aCGH
Version 2.28.0
In Bioconductor since BioC 2.8 (R-2.13) (13 years)
License GPL-2
Depends R (>= 2.10)
Imports
System Requirements
URL
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package gaia_2.28.0.tar.gz
Windows Binary gaia_2.28.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) gaia_2.28.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/gaia
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/gaia
Bioc Package Browser https://code.bioconductor.org/browse/gaia/
Package Short Url https://bioconductor.org/packages/gaia/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.9 Source Archive