cytolib

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see cytolib.

C++ infrastructure for representing and interacting with the gated cytometry


Bioconductor version: 3.9

This package provides the core data structure and API to represent and interact with the gated cytometry data.

Author: Mike Jiang

Maintainer: Mike Jiang <wjiang2 at fhcrc.org>

Citation (from within R, enter citation("cytolib")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("cytolib")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cytolib")
Using cytolib HTML R Script
Reference Manual PDF

Details

biocViews DataImport, DataRepresentation, FlowCytometry, ImmunoOncology, Preprocessing, Software
Version 1.6.0
In Bioconductor since BioC 3.6 (R-3.4) (6.5 years)
License Artistic-2.0
Depends R (>= 3.4)
Imports
System Requirements GNU make, C++11
URL
See More
Suggests knitr
Linking To BH (>= 1.62.0-1), RProtoBufLib(>= 1.1.7)
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me CytoML, flowWorkspace
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package cytolib_1.6.0.tar.gz
Windows Binary cytolib_1.6.0.zip
Mac OS X 10.11 (El Capitan) cytolib_1.6.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/cytolib
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/cytolib
Bioc Package Browser https://code.bioconductor.org/browse/cytolib/
Package Short Url https://bioconductor.org/packages/cytolib/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.9 Source Archive