MmPalateMiRNA

This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see MmPalateMiRNA.

Murine Palate miRNA Expression Analysis


Bioconductor version: 3.9

R package compendium for the analysis of murine palate miRNA two-color expression data.

Author: Guy Brock <guy.brock at louisville.edu>, Partha Mukhopadhyay <p0mukh01 at louisville.edu>, Vasyl Pihur <vasyl.pihur at louisville.edu>, Robert M. Greene <Dr.Bob.Greene at gmail.com>, and M. Michele Pisano <mmpisa01 at louisville.edu>

Maintainer: Guy Brock <guy.brock at louisville.edu>

Citation (from within R, enter citation("MmPalateMiRNA")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MmPalateMiRNA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MmPalateMiRNA")
Palate miRNA Analysis PDF R Script
Reference Manual PDF

Details

biocViews Clustering, DifferentialExpression, GO, Microarray, MultipleComparison, Pathways, Preprocessing, QualityControl, ReportWriting, SequenceMatching, Software, TwoChannel
Version 1.34.0
In Bioconductor since BioC 2.9 (R-2.14) (12.5 years)
License GPL-3
Depends R (>= 2.13.0), methods, Biobase, xtable, limma, statmod, lattice, vsn
Imports limma, lattice, Biobase
System Requirements
URL
See More
Suggests GOstats, graph, Category, org.Mm.eg.db, microRNA, targetscan.Mm.eg.db, RSQLite, DBI, AnnotationDbi, clValid, class, cluster, multtest, RColorBrewer, latticeExtra
Linking To
Enhances
Depends On Me
Imports Me
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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MmPalateMiRNA_1.34.0.tar.gz
Windows Binary MmPalateMiRNA_1.34.0.zip
Mac OS X 10.11 (El Capitan) MmPalateMiRNA_1.34.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MmPalateMiRNA
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MmPalateMiRNA
Bioc Package Browser https://code.bioconductor.org/browse/MmPalateMiRNA/
Package Short Url https://bioconductor.org/packages/MmPalateMiRNA/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.9 Source Archive