FlowRepositoryR

This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see FlowRepositoryR.

FlowRepository R Interface


Bioconductor version: 3.9

This package provides an interface to search and download data and annotations from FlowRepository (flowrepository.org). It uses the FlowRepository programming interface to communicate with a FlowRepository server.

Author: Josef Spidlen [aut, cre]

Maintainer: Josef Spidlen <jspidlen at gmail.com>

Citation (from within R, enter citation("FlowRepositoryR")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("FlowRepositoryR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("FlowRepositoryR")
FlowRepository R Interface PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews FlowCytometry, ImmunoOncology, Infrastructure, Software
Version 1.16.0
In Bioconductor since BioC 3.1 (R-3.2) (9 years)
License Artistic-2.0
Depends R (>= 3.2)
Imports XML, RCurl, tools, utils, jsonlite
System Requirements
URL
See More
Suggests RUnit, BiocGenerics, flowCore, methods
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me flowQB
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package FlowRepositoryR_1.16.0.tar.gz
Windows Binary FlowRepositoryR_1.16.0.zip
Mac OS X 10.11 (El Capitan) FlowRepositoryR_1.16.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/FlowRepositoryR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/FlowRepositoryR
Bioc Package Browser https://code.bioconductor.org/browse/FlowRepositoryR/
Package Short Url https://bioconductor.org/packages/FlowRepositoryR/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.9 Source Archive