MSstatsBioData

This package is for version 3.8 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see MSstatsBioData.

Datasets of published biological studies with DDA or SRM experiments


Bioconductor version: 3.8

Provides the peak intensity data for detecting differentially abundant proteins in seven published biological investigations.

Author: Meena Choi

Maintainer: Meena Choi <mnchoi67 at gmail.com>

Citation (from within R, enter citation("MSstatsBioData")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MSstatsBioData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MSstatsBioData")
MSstatsBioData: Datasets of published biological studies with DDA or SRM experiments HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData, MassSpectrometryData, Proteome
Version 1.4.0
License Artistic-2.0
Depends R (>= 3.4)
Imports
System Requirements
URL
See More
Suggests BiocStyle, knitr, MSstats
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me MSstats
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MSstatsBioData_1.4.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/MSstatsBioData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MSstatsBioData
Package Short Url https://bioconductor.org/packages/MSstatsBioData/
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