Package: globaltest
Version: 5.65.0
Date: 2023-03-30
Title: Testing Groups of Covariates/Features for Association with a
        Response Variable, with Applications to Gene Set Testing
Author: Jelle Goeman and Jan Oosting, with contributions by Livio
        Finos, Aldo Solari, Dominic Edelmann
Maintainer: Jelle Goeman <j.j.goeman@lumc.nl>
Depends: methods, survival
Imports: Biobase, AnnotationDbi, annotate, graphics
Suggests: vsn, golubEsets, KEGGREST, hu6800.db, Rgraphviz, GO.db,
        lungExpression, org.Hs.eg.db, GSEABase, penalized, gss, MASS,
        boot, rpart, mstate
Description: The global test tests groups of covariates (or features)
        for association with a response variable. This package
        implements the test with diagnostic plots and multiple testing
        utilities, along with several functions to facilitate the use
        of this test for gene set testing of GO and KEGG terms.
License: GPL (>= 2)
biocViews: Microarray, OneChannel, Bioinformatics,
        DifferentialExpression, GO, Pathways
Collate: gt-object.R mlogit.R comparative.R diagnosticplots.R
        focuslevel.R generalizedFdistribution.R genesettesting.R gt.R
        inheritance.R models.R options.R utilities.R goodnessoffit.R
LazyLoad: yes
Config/pak/sysreqs: libpng-dev libxml2-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 13:55:12 UTC
RemoteUrl: https://github.com/bioc/globaltest
RemoteRef: HEAD
RemoteSha: f1b66907a7d3cba02c0f815f816fe5c1b638719b
NeedsCompilation: no
Packaged: 2026-01-22 19:31:33 UTC; root
Built: R 4.6.0; ; 2026-01-22 19:33:50 UTC; windows
