Package: epiNEM
Type: Package
Title: epiNEM
Version: 1.35.0
Authors@R: c(person("Martin", "Pirkl",
    email = "martinpirkl@yahoo.de",
    role = c("aut", "cre")),
    person("Madeline", "Diekmann",
    role = c("aut")))
Author: Madeline Diekmann & Martin Pirkl
Maintainer: Martin Pirkl <martinpirkl@yahoo.de>
Description: epiNEM is an extension of the original Nested Effects
        Models (NEM). EpiNEM is able to take into account double
        knockouts and infer more complex network signalling pathways.
        It is tailored towards large scale double knock-out screens.
Depends: R (>= 4.1)
License: GPL-3
Encoding: UTF-8
LazyData: true
biocViews: Pathways, SystemsBiology, NetworkInference, Network
RoxygenNote: 7.3.1
Imports: BoutrosLab.plotting.general, BoolNet, e1071, gtools, stats,
        igraph, utils, lattice, latticeExtra, RColorBrewer, pcalg,
        minet, grDevices, graph, mnem, latex2exp
VignetteBuilder: knitr
Suggests: knitr, RUnit, BiocGenerics, STRINGdb, devtools, rmarkdown,
        GOSemSim, AnnotationHub, org.Sc.sgd.db, BiocStyle
BugReports: https://github.com/cbg-ethz/epiNEM/issues
URL: https://github.com/cbg-ethz/epiNEM/
Config/pak/sysreqs: libglpk-dev libjpeg-dev libpng-dev libxml2-dev
        zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:37:16 UTC
RemoteUrl: https://github.com/bioc/epiNEM
RemoteRef: HEAD
RemoteSha: d7bc809f73980fc998b7e1216ad35e48e2845729
NeedsCompilation: no
Packaged: 2026-02-04 08:51:16 UTC; root
Built: R 4.6.0; ; 2026-02-04 08:53:38 UTC; windows
