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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("intansv")
In most cases, you don't need to download the package archive at all.
intansv
|
This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see intansv.
Integrative analysis of structural variations
Bioconductor version: 3.1
This package provides efficient tools to read and integrate structural variations predicted by popular softwares. Annotation and visulation of structural variations are also implemented in the package.
Author: Wen Yao <ywhzau at gmail.com>
Maintainer: Wen Yao <ywhzau at gmail.com>
Citation (from within R,
enter citation("intansv")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("intansv")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("intansv")
| R Script | An Introduction to intansv | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Annotation, Genetics, Sequencing, Software |
| Version | 1.8.0 |
| In Bioconductor since | BioC 2.13 (R-3.0) (2.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 2.14.0), plyr, ggbio, GenomicRanges |
| Imports | BiocGenerics, IRanges |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | intansv_1.8.0.tar.gz |
| Windows Binary | intansv_1.8.0.zip |
| Mac OS X 10.6 (Snow Leopard) | intansv_1.8.0.tgz |
| Mac OS X 10.9 (Mavericks) | intansv_1.8.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/intansv/tree/release-3.1 |
| Package Short Url | http://bioconductor.org/packages/intansv/ |
| Package Downloads Report | Download Stats |
Documentation »
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